3ZLO

Crystal structure of Bcl-xL in complex with inhibitor (Compound 6).

Structural Biology Knowledgebase: 3ZLO SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.282
  • R-Value Work: 0.193

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3ZLO

Classification: APOPTOSIS

Total Structure Weight: 21357.80

Macromolecule Entities
Molecule Chains Length Organism Details
BCL-2-LIKE PROTEIN 1 A 181 Homo sapiens Fragment: RESIDUES 1-44 AND 85-209
Gene Name(s): BCL2L1 Gene View BCL2L BCLX
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
X8U
Query on X8U

A 2-[(8E)-8-(1,3-benzothiazol-2-ylhydrazinylidene)- 6,7-dihydro-5H-naphthalen-2-yl]-5-(4-phenylbutyl)- 1,3-thiazole-4-carboxylic acid
C31 H28 N4 O2 S2
KJRCRYVHSPWAIC-JGRMKTMXSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
X8U N/A in BindingDB
N/A in BindingMoad
IC50: 1.5 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.282
  • R-Value Work: 0.193
  • Space Group: P 32 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 67.83 α = 90.00
b = 67.83 β = 90.00
c = 67.38 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-02-04
  • Released Date: 2013-04-24
  • Deposition author(s): Czabotar, P.E., Lessene, G.L., Smith, B.J., Colman, P.M.

Revision History

  • 2013-06-05
    Type: Citation | Details: JRNL
  • 2013-05-08
    Type: Citation | Details: JRNL