High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome DOI:10.2210/pdb3zf7/pdb EMDataBank  :2239

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Split Entry The asymmetric unit for this structure is composed of multiple PDB entries: 3ZEQ   3ZEX   3ZEY   3ZF7     Download All Files      Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Ribosome Structure Weight: 869228.22 Molecule: 60S RIBOSOMAL PROTEIN L18 Polymer: 1 Type: protein Length: 193 Chains: I Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Names RPL18-A Tb10.6k15.0410 RPL18-B Tb11.02.1840 UniProtKB:   Protein Feature View | Search PDB | P50885     Molecule: RIBOSOMAL PROTEIN Polymer: 2 Type: protein Length: 214 Chains: J Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Names Tb10.05.0220 Tb11.01.1470 UniProtKB:   Protein Feature View | Search PDB | Q383V8     Molecule: 60S RIBOSOMAL PROTEIN L10, PUTATIVE Polymer: 3 Type: protein Length: 213 Chains: K Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Names Tb09.211.0110 Tb09.211.0340 UniProtKB:   Protein Feature View | Search PDB | Q38EC5     Molecule: 60S RIBOSOMAL PROTEIN L11, PUTATIVE Polymer: 4 Type: protein Length: 194 Chains: L Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Names Tb09.160.5580 Tb09.160.5590 UniProtKB:   Protein Feature View | Search PDB | Q38EI9     Molecule: 60S RIBOSOMAL PROTEIN L12, PUTATIVE Polymer: 5 Type: protein Length: 164 Chains: M Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Name Tb927.8.6030 UniProtKB:   Protein Feature View | Search PDB | Q57YK4     Molecule: 60S RIBOSOMAL PROTEIN L13 Polymer: 6 Type: protein Length: 218 Chains: N Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Name Tb927.3.3310 UniProtKB:   Protein Feature View | Search PDB | Q57V55     Molecule: 60S RIBOSOMAL PROTEIN L13A, PUTATIVE Polymer: 7 Type: protein Length: 222 Chains: O Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Names Tb927.4.3550 Tb927.5.1610 UniProtKB:   Protein Feature View | Search PDB | Q585J5     Molecule: PROBABLE 60S RIBOSOMAL PROTEIN L14 Polymer: 8 Type: protein Length: 189 Chains: P Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 UniProtKB:   Protein Feature View | Search PDB | P55842     Molecule: RIBOSOMAL PROTEIN L15 Polymer: 9 Type: protein Length: 221 Chains: Q Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Name Tb09.244.2720 UniProtKB:   Protein Feature View | Search PDB | Q38CY7     Molecule: 60S RIBOSOMAL PROTEIN L17, PUTATIVE Polymer: 10 Type: protein Length: 166 Chains: R Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Names Tb10.61.2090 Tb11.02.2430 UniProtKB:   Protein Feature View | Search PDB | Q385T6     Molecule: 60S RIBOSOMAL PROTEIN L18A Polymer: 11 Type: protein Length: 179 Chains: S Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Names Tb10.70.3510 Tb11.01.5720 UniProtKB:   Protein Feature View | Search PDB | Q382C4     Molecule: 60S RIBOSOMAL PROTEIN L19, PUTATIVE Polymer: 12 Type: protein Length: 260 Chains: T Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Names Tb927.7.5000 Tb927.7.5020 UniProtKB:   Protein Feature View | Search PDB | Q57ZI7     Molecule: 60S RIBOSOMAL PROTEIN L21E, PUTATIVE Polymer: 13 Type: protein Length: 159 Chains: U Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Names Tb11.0880 Tb11.50.0005 UniProtKB:   Protein Feature View | Search PDB | Q4FKD4     Molecule: 60S RIBOSOMAL PROTEIN L22, PUTATIVE Polymer: 14 Type: protein Length: 130 Chains: V Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Name Tb11.01.1920 UniProtKB:   Protein Feature View | Search PDB | Q383R3     Molecule: 60S RIBOSOMAL PROTEIN L23, PUTATIVE Polymer: 15 Type: protein Length: 139 Chains: W Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Names Tb09.211.2630 Tb09.211.2640 UniProtKB:   Protein Feature View | Search PDB | Q38DP2     Molecule: 60S RIBOSOMAL PROTEIN L23A Polymer: 16 Type: protein Length: 164 Chains: X Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Name Tb927.7.5180 UniProtKB:   Protein Feature View | Search PDB | Q57ZH1     Molecule: 60S RIBOSOMAL PROTEIN L24, PUTATIVE Polymer: 17 Type: protein Length: 125 Chains: Y Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Name Tb10.70.1540 UniProtKB:   Protein Feature View | Search PDB | Q38B56     Molecule: 60S RIBOSOMAL PROTEIN L26, PUTATIVE Polymer: 18 Type: protein Length: 143 Chains: Z Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Name Tb09.211.4850 UniProtKB:   Protein Feature View | Search PDB | Q38D25     Molecule: 60S RIBOSOMAL PROTEIN L27, PUTATIVE Polymer: 19 Type: protein Length: 133 Chains: a Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Names Tb11.01.7535 Tb11.01.7545 UniProtKB:   Protein Feature View | Search PDB | Q381J6     Molecule: 60S RIBOSOMAL PROTEIN L27A Polymer: 20 Type: protein Length: 145 Chains: b Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Names Tb09.211.2650 Tb09.v1.0640 UniProtKB:   Protein Feature View | Search PDB | Q38DN9     Molecule: 60S RIBOSOMAL PROTEIN L28, PUTATIVE Polymer: 21 Type: protein Length: 146 Chains: c Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Names Tb11.02.4050 Tb11.02.4070 UniProtKB:   Protein Feature View | Search PDB | Q385E9     Molecule: 60S RIBOSOMAL PROTEIN L29, PUTATIVE Polymer: 22 Type: protein Length: 71 Chains: d Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Name Tb11.01.1790 UniProtKB:   Protein Feature View | Search PDB | Q383S6     Molecule: 60S RIBOSOMAL PROTEIN L2, PUTATIVE Polymer: 23 Type: protein Length: 260 Chains: e Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Names Tb11.01.7960 Tb927.5.1110 UniProtKB:   Protein Feature View | Search PDB | Q57W56     Molecule: RIBOSOMAL PROTEIN L3, MITOCHONDRIAL, PUTATIVE Polymer: 24 Type: protein Length: 429 Chains: f Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Name Tb927.4.1790 UniProtKB:   Protein Feature View | Search PDB | Q581Q2     Molecule: 60S RIBOSOMAL PROTEIN L30 Polymer: 25 Type: protein Length: 105 Chains: g Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Name Tb10.70.3160 UniProtKB:   Protein Feature View | Search PDB | Q38BI8     Molecule: 60S RIBOSOMAL SUBUNIT PROTEIN L31, PUTATIVE Polymer: 26 Type: protein Length: 188 Chains: h Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Names Tb09.211.3270 Tb09.211.3280 UniProtKB:   Protein Feature View | Search PDB | Q38DH8     Molecule: 60S RIBOSOMAL PROTEIN L32, PUTATIVE Polymer: 27 Type: protein Length: 132 Chains: i Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Name Tb10.100.0155 UniProtKB:   Protein Feature View | Search PDB | Q38CL1     Molecule: 60S RIBOSOMAL PROTEIN L34, PUTATIVE Polymer: 28 Type: protein Length: 170 Chains: j Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Name Tb11.01.1480 UniProtKB:   Protein Feature View | Search PDB | Q383V6     Molecule: 60S RIBOSOMAL PROTEIN L35, PUTATIVE Polymer: 29 Type: protein Length: 127 Chains: k Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Names Tb09.160.0700 Tb09.160.0710 UniProtKB:   Protein Feature View | Search PDB | Q38FW8     Molecule: 60S RIBOSOMAL PROTEIN L35A, PUTATIVE Polymer: 30 Type: protein Length: 149 Chains: l Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Name Tb927.4.2180 UniProtKB:   Protein Feature View | Search PDB | Q584G9     Molecule: RIBOSOMAL PROTEIN L36, PUTATIVE Polymer: 31 Type: protein Length: 109 Chains: m Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Name Tb09.244.2725 UniProtKB:   Protein Feature View | Search PDB | Q38CY6     Molecule: RIBOSOMAL PROTEIN L37 Polymer: 32 Type: protein Length: 84 Chains: n Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Names Tb09.211.0865 Tb11.02.0500 UniProtKB:   Protein Feature View | Search PDB | Q386L1     Molecule: 60S RIBOSOMAL PROTEIN L37A, PUTATIVE Polymer: 33 Type: protein Length: 93 Chains: o Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Names Tb10.100.0110 Tb10.70.0465 UniProtKB:   Protein Feature View | Search PDB | Q38AW9     Molecule: 60S RIBOSOMAL PROTEIN L38, PUTATIVE Polymer: 34 Type: protein Length: 82 Chains: p Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Name Tb09.160.0815 UniProtKB:   Protein Feature View | Search PDB | Q38FV6     Molecule: 60S RIBOSOMAL PROTEIN L39, PUTATIVE Polymer: 35 Type: protein Length: 51 Chains: q Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Name Tb927.8.5260 UniProtKB:   Protein Feature View | Search PDB | Q57UJ8     Molecule: 60S RIBOSOMAL PROTEIN L4 Polymer: 36 Type: protein Length: 374 Chains: r Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Name Tb927.3.5050 UniProtKB:   Protein Feature View | Search PDB | Q582N2     Molecule: UBIQUITIN-60S RIBOSOMAL PROTEIN L40 Polymer: 37 Type: protein Length: 128 Chains: s Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 UniProtKB:   Protein Feature View | Search PDB | P21899     Molecule: 60S RIBOSOMAL PROTEIN L44 Polymer: 38 Type: protein Length: 106 Chains: t Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Names Tb11.02.0740 Tb927.2.6090 UniProtKB:   Protein Feature View | Search PDB | D7SG81     Molecule: 60S RIBOSOMAL PROTEIN L5, PUTATIVE Polymer: 39 Type: protein Length: 308 Chains: u Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Names Tb09.244.2730 Tb09.244.2740 UniProtKB:   Protein Feature View | Search PDB | Q38CY8     Molecule: 60S RIBOSOMAL PROTEIN L6, PUTATIVE Polymer: 40 Type: protein Length: 192 Chains: v Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Name Tb10.26.0560 UniProtKB:   Protein Feature View | Search PDB | Q389K1     Molecule: 60S RIBOSOMAL PROTEIN L7, PUTATIVE Polymer: 41 Type: protein Length: 257 Chains: w Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Names Tb927.7.1740 Tb927.7.1750 UniProtKB:   Protein Feature View | Search PDB | Q57V35     Molecule: 60S RIBOSOMAL PROTEIN L7A, PUTATIVE Polymer: 42 Type: protein Length: 276 Chains: x Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Names Tb927.8.1330 Tb927.8.1340 UniProtKB:   Protein Feature View | Search PDB | Q57VM1     Molecule: 60S RIBOSOMAL PROTEIN L9, PUTATIVE Polymer: 43 Type: protein Length: 189 Chains: y Organism Trypanosoma brucei brucei strain 927/4 GUTat10.1 Gene Name Tb10.70.7010 UniProtKB:   Protein Feature View | Search PDB | Q38CD0         Source Hide Polymer: 1 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 2 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 3 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 4 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 5 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 6 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 7 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 8 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 9 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 10 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 11 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 12 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 13 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 14 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 15 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 16 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 17 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 18 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 19 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 20 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 21 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 22 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 23 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 24 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 25 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 26 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 27 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 28 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 29 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 30 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 31 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 32 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 33 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 34 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 35 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 36 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 37 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 38 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 39 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 40 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 41 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 42 Scientific Name: Trypanosoma brucei brucei   Taxonomy     Polymer: 43 Scientific Name: Trypanosoma brucei brucei   Taxonomy         External Domain Annotations Hide Pfam Classification: 55 Domains - data from Pfam   GO Terms: 90 Terms - data from GO      Structural Biology Knowledgebase Data Hide   Electron Microscopy Database Hide EMDataBank  :  2239     Data in orange boxes are gathered from external resources (when available). 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Biological Assembly            View in 3D More Images... Composite of PDB entries (3ZEY, 3ZEX, 3ZF7, 3ZEQ)         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Hashem, Y.,  des Georges, A.,  Fu, J.,  Buss, S.N.,  Jossinet, F.,  Jobe, A.,  Zhang, Q.,  Liao, H.Y.,  Grassucci, R.A.,  Bajaj, C.,  Westhof, E.,  Madison-Antenucci, S.,  Frank, J. Deposition:   2012-12-10 Release:   2013-02-13 Last Modified (REVDAT):   2013-03-06     Revision History    Hide Mouse over text for details 2013-03-06 Citation 2013-02-20 Citation     Experimental Details Hide Method:   ELECTRON MICROSCOPY Exp. Data: EM Resolution [Å]: 5.57 Aggregation State: PARTICLE Reconstruction Method: SINGLE PARTICLE Specimen Type: VITROUS ICE     Molecule of the Month Hide Ribosomal Subunits Ribosome Ricin