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Phage dUTPases control transfer of virulence genes by a proto-oncogenic G protein-like mechanism. (Staphylococcus bacteriophage 80alpha dUTPase Y84F mutant with dUpNHpp).
3ZF5
Primary Citation
 
 
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  •   Molecular Description Hide
    Classification: Hydrolase
    Structure Weight: 23260.66
    Molecule: DUTPASE
    Polymer: 1 Type: protein Length: 204
    Chains: A
    EC#: 3.6.1.23   
    Mutation: YES
    Details: STRUCTURE IN PRESENCE OF DUMP
    Organism Staphylococcus phage 80alpha
    UniProtKB:   Protein Feature View | Search PDB | A4ZF98  
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Staphylococcus phage 80alpha   Taxonomy   Expression System: Escherichia coli  
     
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    Identifier Details
    3ZEZ  PHAGE DUTPASES CONTROL TRANSFER OF VIRULENCE GENES BY A PROTO-ONCOGENIC G PROTEIN-LIKE MECHANISM. (STAPHYLOCOCCUS BACTERIOPHAGE 80ALPHA DUTPASE WITH DUPNHPP). 
    3ZF0  PHAGE DUTPASES CONTROL TRANSFER OF VIRULENCE GENES BY A PROTO-ONCOGENIC G PROTEIN-LIKE MECHANISM. (STAPHYLOCOCCUS BACTERIOPHAGE 80ALPHA DUTPASE D81A MUTANT WITH DUPNHPP). 
    3ZF1  PHAGE DUTPASES CONTROL TRANSFER OF VIRULENCE GENES BY A PROTO-ONCOGENIC G PROTEIN-LIKE MECHANISM. (STAPHYLOCOCCUS BACTERIOPHAGE 80ALPHA DUTPASE D81N MUTANT WITH DUPNHPP). 
    3ZF2  PHAGE DUTPASES CONTROL TRANSFER OF VIRULENCE GENES BY A PROTO-ONCOGENIC G PROTEIN-LIKE MECHANISM. (STAPHYLOCOCCUS BACTERIOPHAGE 80ALPHA DUTPASE). 
    3ZF3  PHAGE DUTPASES CONTROL TRANSFER OF VIRULENCE GENES BY A PROTO-ONCOGENIC G PROTEIN-LIKE MECHANISM. (STAPHYLOCOCCUS BACTERIOPHAGE 80ALPHA DUTPASE Y84I MUTANT). 
    3ZF4  PHAGE DUTPASES CONTROL TRANSFER OF VIRULENCE GENES BY A PROTO-ONCOGENIC G PROTEIN-LIKE MECHANISM. (STAPHYLOCOCCUS BACTERIOPHAGE 80ALPHA DUTPASE Y81A MUTANT WITH DUPNHPP). 
    3ZF6  PHAGE DUTPASES CONTROL TRANSFER OF VIRULENCE GENES BY A PROTO-ONCOGENIC G PROTEIN-LIKE MECHANISM. (STAPHYLOCOCCUS BACTERIOPHAGE 80ALPHA DUTPASE D81A D110C S168C MUTANT WITH DUPNHPP). 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name Interactions
    DUP
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    Download      		DUP C9 H16 N3 O13 P3
    2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE
    		DUP:3ZF5
    MG
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    Download      		MG Mg
    MAGNESIUM ION
    NI
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    Download      		NI Ni
    NICKEL (II) ION
     
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  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
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  Biological Assembly       
Biological assembly 1 generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Tormo-Mas, M.A.,  Donderis, J.,  Garcia-Caballer, M.,  Alt, A.,  Mir-Sanchis, I.,  Marina, A.,  Penades, J.R.

    Deposition:   2012-12-10
    Release:   2013-01-30
    Last Modified (REVDAT):   2013-04-17
     
  •   Revision History    Hide
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    2013-04-17
    Other
    2013-04-17
    Polymer description
    2013-04-17
    Sequence database correspondence
    2013-04-03
    Refinement description
    2013-04-03
    Entry title
    2013-04-03
    Other
    2013-03-20
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   3.20
    R-Value: 0.224 (obs.)
    R-Free: 0.277
    Space Group: P 21 3
    Unit Cell:
      Length [Å] Angles [°]
    a = 88.24 α = 90.00 
    b = 88.24 β = 90.00 
    c = 88.24 γ = 90.00