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Crystal structure of A20 ZF7 in complex with linear ubiquitin, form I
3VUW
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Protein Binding/metal Binding Protein
    Structure Weight: 37802.69
    Molecule: Polyubiquitin-C
    Polymer: 1 Type: protein Length: 76
    Chains: A, B, C
    Fragment: Ubiquitin
    Organism Homo sapiens
    Gene Name UBC
    UniProtKB:   Protein Feature View | Search PDB | P0CG48  
    Molecule: Tumor necrosis factor alpha-induced protein 3
    Polymer: 2 Type: protein Length: 34
    Chains: E, F, G
    EC#: 3.4.19.12    6.3.2   
    Fragment: A20-type 7 Zinc finger domain, residues 757-789
    Organism Homo sapiens
    Gene Names TNFAIP3 OTUD7C
    UniProtKB:   Protein Feature View | Search PDB | P21580  
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    3VUX   
    3VUY   
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    K
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    K K
    POTASSIUM ION
    ZN
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    ZN Zn
    ZINC ION
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   MyPDB Personal Annotations Hide
     
  •   Deposition Summary Hide
    Authors:   Nishimasu, H.,  Ishitani, R.,  Nureki, O.

    Deposition:   2012-07-09
    Release:   2013-02-13
     
  •   Revision History    Hide
    No revisions since initial release
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   1.95
    R-Value: 0.180 (obs.)
    R-Free: 0.222
    Space Group: P 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 39.17 α = 70.08 
    b = 51.99 β = 80.25 
    c = 52.18 γ = 78.05