Crystal structure of AMP-PNP bound Enterococcus hirae V1-ATPase [bV1] DOI:10.2210/pdb3vr6/pdb

3VR6   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A+S)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Hydrolase Structure Weight: 393079.39 Molecule: V-type sodium ATPase catalytic subunit A Polymer: 1 Type: protein Length: 600 Chains: A, B, C EC#: 3.6.3.15    Organism Enterococcus hirae Gene Names ntpA EHR_08260 UniProtKB:   Protein Feature View | Search PDB | Q08636     Molecule: V-type sodium ATPase subunit B Polymer: 2 Type: protein Length: 465 Chains: D, E, F EC#: 3.6.3.15    Organism Enterococcus hirae Gene Names ntpB EHR_08265 UniProtKB:   Protein Feature View | Search PDB | Q08637     Molecule: V-type sodium ATPase subunit D Polymer: 3 Type: protein Length: 217 Chains: G EC#: 3.6.3.15    Organism Enterococcus hirae Gene Names ntpD EHR_08270 UniProtKB:   Protein Feature View | Search PDB | P43435     Molecule: V-type sodium ATPase subunit G Polymer: 4 Type: protein Length: 115 Chains: H EC#: 3.6.3.15    Organism Enterococcus hirae Gene Names ntpG ntpQ EHR_08255 UniProtKB:   Protein Feature View | Search PDB | P43455         Source Hide Polymer: 1 Scientific Name: Enterococcus hirae   Taxonomy   Expression System: Cell free synthesis   Polymer: 2 Scientific Name: Enterococcus hirae   Taxonomy   Expression System: Cell free synthesis   Polymer: 3 Scientific Name: Enterococcus hirae   Taxonomy   Expression System: Cell free synthesis   Polymer: 4 Scientific Name: Enterococcus hirae   Taxonomy   Expression System: Cell free synthesis       Related PDB Entries Hide Identifier Details 3VR2    3VR3    3VR4    3VR5        Ligand Chemical Component Hide Identifier Formula Name Interactions ANP Search  Download  C10 H17 N6 O12 P3 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER   Ligand Explorer MG Search  Download  Mg MAGNESIUM ION   Ligand Explorer     External Domain Annotations Hide Pfam Classification: 8 Domains - data from Pfam   GO Terms: 26 Terms - data from GO      Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PISA (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Arai, S.,  Saijo, S.,  Suzuki, K.,  Mizutani, K.,  Kakinuma, Y.,  Ishizuka-Katsura, Y.,  Ohsawa, N.,  Terada, T.,  Shirouzu, M.,  Yokoyama, S.,  Iwata, S.,  Yamato, I.,  Murata, T. Deposition:   2012-04-03 Release:   2013-01-16 Last Modified (REVDAT):   2013-02-06     Revision History    Hide Mouse over text for details 2013-02-06 Citation     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   2.68 R-Value: 0.185 (obs.) R-Free: 0.246 Space Group: P 21 21 21 Unit Cell:   Length [Å] Angles [°] a = 126.15 α = 90.00  b = 127.42 β = 90.00  c = 225.25 γ = 90.00