3VQJ

Crystal Structutre of Thiobacillus thioparus THI115 Carbonyl Sulfide Hydrolase

Structural Biology Knowledgebase: 3VQJ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.2 Å
  • R-Value Free: 0.170
  • R-Value Work: 0.135

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3VQJ

Classification: HYDROLASE

Total Structure Weight: 23470.97

Macromolecule Entities
Molecule Chains Length Organism Details
Carbonyl sulfide hydrolase A 219 Thiobacillus thioparus EC#: 4.2.1.1 IUBMB
Gene Name(s): cos

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NA
Query on NA

A SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.2 Å
  • R-Value Free: 0.170
  • R-Value Work: 0.135
  • Space Group: I 4 2 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 90.24 α = 90.00
b = 90.24 β = 90.00
c = 104.98 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-03-24
  • Released Date: 2013-02-27
  • Deposition author(s): Katayama, Y., Noguchi, K., Ogawa, T., Ohtaki, A., Odaka, M., Yohda, M.

Revision History

  • 2013-04-03
    Type: Citation | Details: Citation update