3VD2

structure of p73 DNA binding domain tetramer modulates p73 transactivation

Structural Biology Knowledgebase: 3VD2 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 4.0 Å
  • R-Value Free: 0.284
  • R-Value Work: 0.248

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3VD2

Classification: ANTITUMOR PROTEIN / DNA

Total Structure Weight: 168727.91


Macromolecule Entities
Molecule Chains Length Organism Details
Tumor protein p73 A, B, C..., D, I, JA, B, C, D, I, J 210 Homo sapiens Fragment: unp residues 115-312
Gene Name(s): TP73 Gene View P73
Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*AP*TP*GP*GP*AP*CP*AP*TP*GP*TP*CP*CP*AP*T)-3') E, F, G... , H, K, L E, F, G, H, K, L 14 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A, B, C, D, I, J ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer
 
JSmol

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 4.0 Å
  • R-Value Free: 0.284
  • R-Value Work: 0.248
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 158.40 α = 90.00
b = 91.13 β = 90.20
c = 137.48 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-01-04
  • Released Date: 2012-04-18
  • Deposition author(s): Ethayathulla, A.S., Tse, P.W., Nguyen, S., Viadiu, H.

Revision History

  • 2012-07-25
    Type: Citation | Details: Citation update