Structure of U2AF65 variant with BrU5C6 DNA DOI:10.2210/pdb3vaj/pdb   NDB ID: NA1534

3VAJ   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: RNA Binding Protein/dna Structure Weight: 44343.21 Molecule: Splicing factor U2AF 65 kDa subunit Polymer: 1 Type: protein Length: 174 Chains: A, B Fragment: RNA Binding Domains 1 and 2 Organism Homo sapiens Gene Names U2AF2 U2AF65 UniProtKB:   Protein Feature View | Search PDB | P26368     Molecule: DNA (5'-D(*UP*UP*UP*UP*(BRU)P*CP*U)-3') Polymer: 2 Type: dna Length: 7 Chains: E, P     Source Hide Polymer: 1 Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli   Polymer: 2 Scientific Name: Synthetic construct   Taxonomy         Related PDB Entries Hide Identifier Details 2G4B  U2AF65 variant with polyuridine tract  2HZC  N-terminal RRM of U2AF65  3VAF    3VAG    3VAH    3VAI    3VAK    3VAL    3VAM    3VAN    3VAO        Ligand Chemical Component Hide Identifier Formula Name Interactions CPQ Search  Download  C42 H75 N3 O15 N,N-BIS(3-D-GLUCONAMIDOPROPYL)DEOXYCHOLAMIDE   Ligand Explorer DIO Search  Download  C4 H8 O2 1,4-DIETHYLENE DIOXIDE   Ligand Explorer GOL Search  Download  C3 H8 O3 GLYCEROL   Ligand Explorer SO4 Search  Download  O4 S SULFATE ION   Ligand Explorer     Modified Residues Hide Identifier Formula Parent Type BRU Search  C9 H12 Br N2 O8 P DU dnaLinking     External Domain Annotations Hide Pfam Classification: 3 Domains - data from Pfam       Structural Biology Knowledgebase Data Hide   Nucleic Acid Database Hide View the NDB ID associated with this structure: NA1534     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Jenkins, J.L.,  Kielkopf, C.L. Deposition:   2011-12-29 Release:   2013-02-13     Revision History    Hide No revisions since initial release     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   1.90 R-Value: 0.195 (obs.) R-Free: 0.236 Space Group: C 2 Unit Cell:   Length [Å] Angles [°] a = 163.87 α = 90.00  b = 36.97 β = 125.66  c = 99.99 γ = 90.00