3UQG

c-SRC kinase domain in complex with bumpless BKI analog UW1243

Structural Biology Knowledgebase: 3UQG SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.259
  • R-Value Work: 0.229

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3UQG

Classification: TRANSFERASE / TRANSFERASE INHIBITOR

Total Structure Weight: 65918.33

Macromolecule Entities
Molecule Chains Length Organism Details
Proto-oncogene tyrosine-protein kinase Src A, B 286 Gallus gallus EC#: 2.7.10.2 IUBMB
Fragment: kinase domain (UNP residues 251-533)
Gene Name(s): SRC Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
B5A
Query on B5A

A, B 1-(piperidin-4-ylmethyl)-1H-pyrazolo[3,4- d]pyrimidin-4-amine
C11 H16 N6
WIWYTHZSXOQVGK-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
B5A IC50: >10000 nM (99) BindingDB
Ki: >10000 nM (99) BindingDB

N/A in BindingMoad
Ki: 10000 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.259
  • R-Value Work: 0.229
  • Space Group: P 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 42.54 α = 78.17
b = 63.72 β = 89.34
c = 74.98 γ = 90.08

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-11-20
  • Released Date: 2012-03-14
  • Deposition author(s): Merritt, E.A., Larson, E.T.

Revision History

  • 2012-04-18
    Type: Citation | Details: Citation update