3UCE

Crystal structure of a small-chain dehydrogenase in complex with NADPH

Structural Biology Knowledgebase: 3UCE SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.219
  • R-Value Work: 0.175

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3UCE

Classification: OXIDOREDUCTASE

Total Structure Weight: 97706.10

Macromolecule Entities
Molecule Chains Length Organism Details
Dehydrogenase A, B, C, D 223 Vibrio vulnificus Gene Name(s): VVA1599

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NDP
Query on NDP

A, B, C, D NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
C21 H30 N7 O17 P3
ACFIXJIJDZMPPO-NNYOXOHSSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.219
  • R-Value Work: 0.175
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 69.63 α = 90.00
b = 96.26 β = 103.99
c = 72.11 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-10-26
  • Released Date: 2012-11-28
  • Deposition author(s): Buysschaert, G., Verstraete, K., Savvides, S., Vergauwen, B.

Revision History

  • 2013-03-13
    Type: Citation | Details: Citation update