Human MMP8 in complex with L-glutamate motif inhibitor DOI:10.2210/pdb3tt4/pdb

3TT4   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A+S)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Hydrolase/hydrolase Inhibitor Structure Weight: 18449.91 Molecule: Neutrophil collagenase Polymer: 1 Type: protein Length: 159 Chains: A EC#: 3.4.24.34    Fragment: MMP8 catalytic domain (UNP residues 104-262) Organism Homo sapiens Gene Names MMP8 CLG1 UniProtKB:   Protein Feature View | Search PDB | P22894         Source Hide Polymer: 1 Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli       Related PDB Entries Hide Identifier Details 2OY2  Human MMP-8 in complex with peptide IAG  3DPE  Crystal structure of the complex between MMP-8 and a non-zinc chelating inhibitor  3TS4    3TSK    3TVC        Ligand Chemical Component Hide Identifier Formula Name Interactions CA Search  Download  Ca CALCIUM ION   Ligand Explorer E1S Search  Download  C19 H22 N2 O4 S N~2~-{3-[4-(5-methylthiophen-2-yl)phenyl]propanoyl}- L-alpha-glutamine   Ligand Explorer MES Search  Download  C6 H13 N O4 S 2-(N-MORPHOLINO)-ETHANESULFONIC ACID   Ligand Explorer ZN Search  Download  Zn ZINC ION   Ligand Explorer     External Ligand Annotations Hide Identifier   Binding Affinity (Sequence Identity %) E1S Search  Download  Ki: 5.3 nM (100) - data from BindingDB   N/A in BindingMoad N/A in PDBbind     External Domain Annotations Hide Pfam Classification: 1 Domain - data from Pfam       Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PISA (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Stura, E.A.,  Dive, V.,  Devel, L.,  Czarny, B.,  Beau, F.,  Vera, L. Deposition:   2011-09-14 Release:   2012-06-20 Last Modified (REVDAT):   2012-10-17     Revision History    Hide Mouse over text for details 2012-10-17 Citation     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   1.88 R-Value: 0.194 (obs.) R-Free: 0.258 Space Group: P 21 21 21 Unit Cell:   Length [Å] Angles [°] a = 32.72 α = 90.00  b = 69.37 β = 90.00  c = 70.31 γ = 90.00