3SZV

Crystal structure of Pseudomonas aeruginosa OccK3 (OpdO)

Structural Biology Knowledgebase: 3SZV SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.45 Å
  • R-Value Free: 0.198
  • R-Value Work: 0.183

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3SZV

Classification: MEMBRANE PROTEIN

Total Structure Weight: 46424.54

Macromolecule Entities
Molecule Chains Length Organism Details
Pyroglutatmate porin OpdO A 401 Pseudomonas aeruginosa Fragment: unp residues 26-409
Gene Name(s): opdO PA2113

Membrane Protein

Source: mpstruc | Group: BETA-BARREL

Subgroup Name: Outer Membrane Carboxylate Channels (Occ)

Protein Name: OccK3 (OpdO) aromatic hydrocarbon channel


Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
C8E
Query on C8E

A (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
C16 H34 O5
FEOZZFHAVXYAMB-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.45 Å
  • R-Value Free: 0.198
  • R-Value Work: 0.183
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 148.92 α = 90.00
b = 78.77 β = 91.60
c = 50.50 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-07-19
  • Released Date: 2012-02-08
  • Deposition author(s): Bert van den, B., Elif, E.

Revision History

No revisions since initial release