3SOB

The structure of the first YWTD beta propeller domain of LRP6 in complex with a FAB


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.212
  • R-Value Work: 0.174

Literature

Macromolecules
Sequence Display for 3SOB

Classification: PROTEIN BINDING / IMMUNE SYSTEM

Total Structure Weight: 88522.46

Macromolecule Entities
Molecule Chains Length Organism Details
antibody light chain L 237 Homo sapiens
Low-density lipoprotein receptor-related protein 6 B 316 Homo sapiens Fragment: UNP residues 20-335
Gene Name(s): LRP6 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
antibody heavy chain H 256 Homo sapiens

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CA
Query on CA

B CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.212
  • R-Value Work: 0.174
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 167.04 α = 90.00
b = 83.36 β = 111.80
c = 62.84 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-06-30
  • Released Date: 2011-09-21
  • Deposition author(s): Wang, W., Bourhis, E., Tam, C., Zhang, Y., Rouge, L., Wu, Y., Franke, Y., Cochran, A.G.

Revision History

  • Version 1_0: 2011-09-21

    Type: Initial release

  • Version 1_1: 2013-08-28

    Type: Database references

  • Version 1_2: 2014-05-14

    Type: Refinement description