Structural basis for norovirus inhibition and fucose mimicry by citrate DOI:10.2210/pdb3ry8/pdb

3RY8   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A+S)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Viral Protein Structure Weight: 70482.45 Molecule: Capsid protein Polymer: 1 Type: protein Length: 319 Chains: A, B Fragment: P domain (UNP residues 225-538) Organism Norwalk virus UniProtKB:   Protein Feature View | Search PDB | Q5F4T5         Source Hide Polymer: 1 Scientific Name: Norwalk virus   Taxonomy   Expression System: Escherichia coli       Related PDB Entries Hide Identifier Details 3ONU    3Q39    3Q3A        Ligand Chemical Component Hide Identifier Formula Name Interactions EDO Search  Download  C2 H6 O2 1,2-ETHANEDIOL   Ligand Explorer FLC Search  Download  C6 H5 O7 CITRATE ANION   Ligand Explorer     External Ligand Annotations Hide Identifier   Binding Affinity (Sequence Identity %) FLC Search  Download  N/A in BindingDB Kd: 460000 nM - data from BindingMOAD   Kd: 460000 nM - data from PDBbind       External Domain Annotations Hide Pfam Classification: 2 Domains - data from Pfam       Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PISA (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Hansman, G.S.,  McLellan, J.S.,  Kwong, P.D Deposition:   2011-05-11 Release:   2011-11-09 Last Modified (REVDAT):   2012-07-25     Revision History    Hide Mouse over text for details 2012-07-25 Citation     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   1.40 R-Value: 0.139 (obs.) R-Free: 0.151 Space Group: P 21 Unit Cell:   Length [Å] Angles [°] a = 63.76 α = 90.00  b = 79.81 β = 96.84  c = 69.61 γ = 90.00      Molecule of the Month Hide ABO Blood Type Glycosyltransferases