Structure of an HIV epitope scaffold in complex with neutralizing antibody b12 Fab DOI:10.2210/pdb3ru8/pdb

3RU8   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A+S)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: De Novo Protein , Immune System Structure Weight: 79058.48 Molecule: Epitope Scaffold 2bodx43 Polymer: 1 Type: protein Length: 282 Chains: X Organism Thermobifida fusca Human immunodeficiency virus synthetic construct Molecule: Antibody b12, Heavy Chain Polymer: 2 Type: protein Length: 230 Chains: H Organism Homo sapiens Molecule: Antibody b12, Light Chain Polymer: 3 Type: protein Length: 215 Chains: L Organism Homo sapiens     Source Hide Polymer: 1 Scientific Name: Human immunodeficiency virus, synthetic construct, thermomonospora fusca   Taxonomy   Expression System: Escherichia coli   Polymer: 2 Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Homo sapiens   Polymer: 3 Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Homo sapiens       Ligand Chemical Component Hide Identifier Formula Name Interactions GOL Search  Download  C3 H8 O3 GLYCEROL   Ligand Explorer     External Domain Annotations Hide Pfam Classification: 10 Domains - data from Pfam       Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PISA (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Carrico, C.T.D.,  Strong, R.K. Deposition:   2011-05-04 Release:   2011-11-02 Last Modified (REVDAT):   2012-02-22     Revision History    Hide Mouse over text for details 2012-02-22 Citation     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   2.07 R-Value: 0.170 (obs.) R-Free: 0.203 Space Group: P 21 21 21 Unit Cell:   Length [Å] Angles [°] a = 90.45 α = 90.00  b = 93.10 β = 90.00  c = 94.37 γ = 90.00      Molecule of the Month Hide Epidermal Growth Factor Nanobodies Antibodies Hemagglutinin