3PHJ

Shikimate 5-Dehydrogenase (aroE) from Helicobacter pylori in complex with 3-Dehydroshikimate

Structural Biology Knowledgebase: 3PHJ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.215
  • R-Value Work: 0.204

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3PHJ

Classification: OXIDOREDUCTASE

Total Structure Weight: 60626.71

Macromolecule Entities
Molecule Chains Length Organism Details
Shikimate dehydrogenase A, B 269 Helicobacter pylori EC#: 1.1.1.25 IUBMB
Gene Name(s): aroE HP_1249
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
DHK
Query on DHK

A, B 3-DEHYDROSHIKIMATE
C7 H10 O5
YVYKOQWMJZXRRM-UYFOZJQFSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.215
  • R-Value Work: 0.204
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 44.59 α = 90.00
b = 47.16 β = 97.63
c = 124.12 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-11-04
  • Released Date: 2011-11-09
  • Deposition author(s): Cheng, W.C., Lin, S.C., Lin, C.H., Wang, W.C.

Revision History

No revisions since initial release