3P9U

Crystal structure of TetX2 from Bacteroides thetaiotaomicron with substrate analogue

Structural Biology Knowledgebase: 3P9U SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.81 Å
  • R-Value Free: 0.282
  • R-Value Work: 0.238

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3P9U

Classification: OXIDOREDUCTASE

Total Structure Weight: 175720.46

Macromolecule Entities
Molecule Chains Length Organism Details
TetX2 protein A, B, C, D 378 Bacteroides thetaiotaomicron Mutation: E94K, E266K

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FAD
Query on FAD

A, B, C, D FLAVIN-ADENINE DINUCLEOTIDE
C27 H33 N9 O15 P2
VWWQXMAJTJZDQX-UYBVJOGSSA-N
Ligand Explorer
 
JSmol
SO4
Query on SO4

A, B, C, D SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
JSmol
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B, C, D L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.81 Å
  • R-Value Free: 0.282
  • R-Value Work: 0.238
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 87.70 α = 90.00
b = 67.33 β = 100.31
c = 153.79 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-10-18
  • Released Date: 2011-04-27
  • Deposition author(s): Walkiewicz, K., Davlieva, M., Sun, C., Lau, K., Shamoo, Y.

Revision History

  • 2013-06-19
    Type: Citation | Details: Citation update
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4