3OXN

The crystal structure of a putative transcriptional regulator from Vibrio parahaemolyticus


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.290
  • R-Value Work: 0.245

Literature

Macromolecules
Sequence Display for 3OXN

Classification: TRANSCRIPTION REGULATOR

Total Structure Weight: 111335.69

Macromolecule Entities
Molecule Chains Length Organism Details
Putative transcriptional regulator, LysR family A, B, C, D 241 Vibrio parahaemolyticus Fragment: sequence database residues 99-330
Gene Name(s): VP0027
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

D SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B, C, D L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.290
  • R-Value Work: 0.245
  • Space Group: P 1

Unit Cell:

Length (Å) Angle (°)
a = 50.32 α = 86.19
b = 50.49 β = 82.89
c = 108.12 γ = 86.74

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-09-21
  • Released Date: 2010-10-13
  • Deposition author(s): Zhang, Z., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)

Revision History

  • 2011-07-13
    Type: Version format compliance