3OER

Crystal structure of trimeric frataxin from the yeast saccharomyces cerevisiae, complexed with cobalt

Structural Biology Knowledgebase: 3OER SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.2 Å
  • R-Value Free: 0.255
  • R-Value Work: 0.204

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3OER

Classification: TRANSPORT PROTEIN

Total Structure Weight: 13730.23

Macromolecule Entities
Molecule Chains Length Organism Details
Frataxin homolog, mitochondrial A 123 Saccharomyces cerevisiae EC#: 1.16.3.1 IUBMB
Fragment: UNP residues 52-174
Mutation: Y73A
Gene Name(s): YFH1 YDL120W

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CO
Query on CO

A COBALT (II) ION
Co
XLJKHNWPARRRJB-UHFFFAOYSA-N
Ligand Explorer
 
JSmol

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.2 Å
  • R-Value Free: 0.255
  • R-Value Work: 0.204
  • Space Group: I 21 3
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 121.20 α = 90.00
b = 121.20 β = 90.00
c = 121.20 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-08-13
  • Released Date: 2011-08-24
  • Deposition author(s): Soderberg, C.A.G., Rajan, S., Gakh, O., Ta, C., Isaya, G., Al-Karadaghi, S.

Revision History

  • 2011-12-21
    Type: Citation | Details: Citation update