3MK9

Stabilized Ricin Immunogen 1-33/44-198

Structural Biology Knowledgebase: 3MK9 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.08 Å
  • R-Value Free: 0.236
  • R-Value Work: 0.210

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3MK9

Classification: HYDROLASE

Total Structure Weight: 21541.47

Macromolecule Entities
Molecule Chains Length Organism Details
Ricin A 189 Ricinus communis EC#: 3.2.2.22 IUBMB
Mutation: ΔT69, ΔG70, ΔA71, ΔD72, ΔV73, ΔR74, ΔH75, ΔE76, ΔI77, ΔP78, V49C, E99C
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.08 Å
  • R-Value Free: 0.236
  • R-Value Work: 0.210
  • Space Group: I 2 2 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 51.74 α = 90.00
b = 72.77 β = 90.00
c = 96.38 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-04-14
  • Released Date: 2010-11-10
  • Deposition author(s): Legler, P.M., Compton, J.R., Millard, C.B.

Revision History

  • 2012-01-25
    Type: Citation | Details: Citation update
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4