3LNX

Second PDZ domain from human PTP1E


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.64 Å
  • R-Value Free: 0.237
  • R-Value Work: 0.196

Literature

Macromolecules
Sequence Display for 3LNX

Classification: SIGNALING PROTEIN

Total Structure Weight: 64107.26

Macromolecule Entities
Molecule Chains Length Organism Details
Tyrosine-protein phosphatase non-receptor type 13 A, B, C..., D, E, FA, B, C, D, E, F 96 Homo sapiens EC#: 3.1.3.48 IUBMB
Fragment: PDZ2 domain
Gene Name(s): PTPN13 Gene View PNP1 PTP1E PTPL1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
IOD
Query on IOD

A, B, C, D, E, F IODIDE ION
I
XMBWDFGMSWQBCA-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SCN
Query on SCN

A, B, C, D, E, F THIOCYANATE ION
C N S
ZMZDMBWJUHKJPS-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.64 Å
  • R-Value Free: 0.237
  • R-Value Work: 0.196
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 63.02 α = 90.00
b = 95.15 β = 90.00
c = 101.99 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-02-03
  • Released Date: 2010-02-23
  • Deposition author(s): Zhang, J., Chang, A., Ke, H., Phillips Jr., G.N., Lee, A.L., Center for Eukaryotic Structural Genomics (CESG)

Revision History

  • 2011-07-13
    Type: Version format compliance
  • 2016-09-28
    Type: Database references