3LEX

2F5 Epitope scaffold elicited anti-HIV-1 monoclonal antibody 11F10 in complex with HIV-1 GP41

Structural Biology Knowledgebase: 3LEX SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.97 Å
  • R-Value Free: 0.198
  • R-Value Work: 0.165

Literature

Macromolecules
Sequence Display for 3LEX

Classification: IMMUNE SYSTEM

Total Structure Weight: 98334.47

Macromolecule Entities
Molecule Chains Length Organism Details
11f10 Antibody Heavy Chain A, H 221 Mus musculus
11f10 Antibody Light Chain B, L 219 Mus musculus
Envelope glycoprotein gp41 C, P 9 Human immunodeficiency virus 1 Gene Name(s): env
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Membrane Protein

Source: inferred by homology | Group: ALPHA-HELICAL

Subgroup Name: Channels: Potassium, Sodium, & Proton Ion-Selective

Protein Name: KvAP Voltage-gated potassium Channel in complex with Fab


Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
NH2
Query on NH2
C, P NON-POLYMER H2 N --

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.97 Å
  • R-Value Free: 0.198
  • R-Value Work: 0.165
  • Space Group: P 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 34.54 α = 90.08
b = 70.96 β = 90.02
c = 78.26 γ = 90.29

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-01-15
  • Released Date: 2010-09-29
  • Deposition author(s): Ofek, G., Guenaga, F.J., Schief, W.R., Skinner, J., Baker, D., Wyatt, R., Kwong, P.D.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4