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Structure of Mss116p bound to ssRNA and AMP-PNP
DOI:10.2210/pdb3i5x/pdb   NDB ID: NA0086
3I5X
Primary Citation
 
 
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  •   Molecular Description Hide
    Classification: Hydrolase/rna
    Structure Weight: 68031.63
    Molecule: ATP-dependent RNA helicase MSS116
    Polymer: 1 Type: protein Length: 563
    Chains: A
    EC#: 3.6.4.13   
    Fragment: UNP residues 37 to 597
    Organism Saccharomyces cerevisiae
    Gene Names MSS116 YDR194C YD9346.05C
    UniProtKB:   Protein Feature View | Search PDB | P15424  
    Molecule: 5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3'
    Polymer: 2 Type: rna Length: 10
    Chains: B
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Yeast Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
     
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    Identifier Details
    3I5Y   
    3I61   
    3I62   
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name Interactions
    ANP
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    ANP C10 H17 N6 O12 P3
    PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
    ANP:3I5X
    MG
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    MG Mg
    MAGNESIUM ION
     
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  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: NA0086
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Del Campo, M.,  Lambowitz, A.M.

    Deposition:   2009-07-06
    Release:   2009-09-08
    Last Modified (REVDAT):   2011-07-13
     
  •   Revision History    Hide
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    2011-07-13
    Flag residual B-value
    2011-07-13
    Refinement description
    2011-07-13
    Version format compliance
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   1.90
    R-Value: 0.192 (obs.)
    R-Free: 0.225
    Space Group: P 21 21 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 88.54 α = 90.00 
    b = 126.52 β = 90.00 
    c = 55.52 γ = 90.00