3HNT

CS-35 Fab complex with a linear, terminal oligoarabinofuranosyl tetrasaccharide from lipoarabinomannan


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.255
  • R-Value Work: 0.196

Literature

Macromolecules
Sequence Display for 3HNT

Classification: IMMUNE SYSTEM

Total Structure Weight: 48136.54

Macromolecule Entities
Molecule Chains Length Organism Details
CS-35 Fab Heavy Chain H 220 Mus musculus Fragment: Heavy Chain
CS-35 Fab Light Chain L 214 Mus musculus Fragment: Light Chain

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
AXR
Query on AXR

H methyl alpha-D-arabinofuranoside
1-O-methyl-alpha-D-arabinofuranoside (Synonym)
C6 H12 O5
NALRCAPFICWVAQ-ZXXMMSQZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
BXX
Query on BXX

H beta-D-arabinofuranose
C5 H10 O5
HMFHBZSHGGEWLO-SQOUGZDYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
BXY
Query on BXY

H alpha-D-arabinofuranose
C5 H10 O5
HMFHBZSHGGEWLO-MBMOQRBOSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.255
  • R-Value Work: 0.196
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 146.70 α = 90.00
b = 95.79 β = 102.52
c = 35.79 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-06-01
  • Released Date: 2009-07-21
  • Deposition author(s): Murase, T., Zheng, R.B., Joe, M., Bai, Y., Marcus, S.L., Lowary, T.L., Ng, K.K.S.

Revision History

  • Version 1_0: 2009-07-21

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Advisory, Version format compliance