3HM3

The Structure and conformation of Lys-63 linked tetra-ubiquitin


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.96 Å
  • R-Value Free: 0.236
  • R-Value Work: 0.186

Literature

Macromolecules
Sequence Display for 3HM3

Classification: SIGNALING PROTEIN

Total Structure Weight: 34699.78

Macromolecule Entities
Molecule Chains Length Organism Details
Ubiquitin A, B, C, D 76 Homo sapiens Gene Name(s): UBC Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A, B, C, D ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.96 Å
  • R-Value Free: 0.236
  • R-Value Work: 0.186
  • Space Group: P 21 3

Unit Cell:

Length (Å) Angle (°)
a = 105.88 α = 90.00
b = 105.88 β = 90.00
c = 105.88 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-05-28
  • Released Date: 2009-08-25
  • Deposition author(s): Datta, A.B., Hura, G.L., Wolberger, C.

Revision History

  • Version 1_0: 2009-08-25

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Advisory, Version format compliance

  • Version 1_2: 2017-11-01

    Type: Refinement description