3H5C

X-Ray Structure of Protein Z-Protein Z Inhibitor Complex

Structural Biology Knowledgebase: 3H5C SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.26 Å
  • R-Value Free: 0.269
  • R-Value Work: 0.201

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3H5C

Classification: Hydrolase Inhibitor / blood clotting

Total Structure Weight: 85247.04

Macromolecule Entities
Molecule Chains Length Organism Details
Protein Z-dependent protease inhibitor A 423 Homo sapiens Gene Name(s): SERPINA10 Gene View ZPI UNQ707/PRO1358
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Vitamin K-dependent protein Z B 317 Homo sapiens Gene Name(s): PROZ Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

A, B N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
BGC
Query on BGC

B BETA-D-GLUCOSE
C6 H12 O6
WQZGKKKJIJFFOK-VFUOTHLCSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.26 Å
  • R-Value Free: 0.269
  • R-Value Work: 0.201
  • Space Group: P 65 2 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 119.93 α = 90.00
b = 119.93 β = 90.00
c = 347.67 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-04-21
  • Released Date: 2010-04-28
  • Deposition author(s): Dementiev, A.A., Huang, X., Olson, S.T., Gettins, P.G.W.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4