3GO1

Crystal structure of anti-HIV-1 Fab 268-D in complex with V3 peptide MN


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.89 Å
  • R-Value Free: 0.213
  • R-Value Work: 0.191

Literature

Macromolecules
Sequence Display for 3GO1

Classification: IMMUNE SYSTEM

Total Structure Weight: 48192.58

Macromolecule Entities
Molecule Chains Length Organism Details
Fab 268-D, light chain L 209 Homo sapiens
Fab 268-D, heavy chain H 222 Homo sapiens
Envelope glycoprotein gp160 P 14 Human immunodeficiency virus 1 Gene Name(s): env
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

H, L SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.89 Å
  • R-Value Free: 0.213
  • R-Value Work: 0.191
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 46.38 α = 90.00
b = 69.26 β = 107.24
c = 71.69 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-03-18
  • Released Date: 2010-06-23
  • Deposition author(s): Kong, X.P., Burke, V.J.

Revision History

  • Version 1_0: 2010-06-23

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance

  • Version 1_2: 2017-11-01

    Type: Refinement description, Source and taxonomy