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Crystal structure of dipeptidyl peptidase IV in complex with a pyrimidinedione inhibitor 2
3G0D
Primary Citation
 
 
  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Molecular Description Hide
    Classification: Hydrolase/hydrolase Inhibitor
    Structure Weight: 349899.56
    Molecule: Dipeptidyl peptidase 4
    Polymer: 1 Type: protein Length: 740
    Chains: A, B, C, D
    EC#: 3.4.14.5   
    Fragment: UNP residues 39-766
    Organism Homo sapiens
    Gene Names DPP4 ADCP2 CD26
    UniProtKB:   Protein Feature View | Search PDB | P27487  
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Spodoptera frugiperda  
    Polymer: 4
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    3G0B  Crystal structure of dipeptidyl peptidase IV in complex with TAK-322 
    3G0C  Crystal structure of dipeptidyl peptidase IV in complex with a pyrimidinedione inhibitor 1 
    3G0G  Crystal structure of dipeptidyl peptidase IV in complex with a pyrimidinedione inhibitor 3 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name Interactions
    NAG
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    Download      		NAG C8 H15 N O6
    N-ACETYL-D-GLUCOSAMINE
    XIH
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    Download      		XIH C20 H23 N7 O2
    2-({8-[(3R)-3-AMINOPIPERIDIN-1-YL]-1,3-DIMETHYL- 2,6-DIOXO-1,2,3,6-TETRAHYDRO-7H-PURIN-7-YL}METHYL)BENZONITRILE
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    XIH
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    Download      		XIH
    Ki: 2 nM (100) - data from BindingDB  
    IC50: 5 nM - data from BindingMOAD  
    IC50: 5 nM - data from PDBbind  
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
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  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PISA (software)
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