3FHF

Crystal structure of Methanocaldococcus jannaschii 8-oxoguanine DNA glycosylase (MjOgg)

Structural Biology Knowledgebase: 3FHF SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.251
  • R-Value Work: 0.202

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3FHF

Classification: DNA repair HYDROLASE LYASE

Total Structure Weight: 25825.76

Macromolecule Entities
Molecule Chains Length Organism Details
N-glycosylase/DNA lyase A 214 Methanocaldococcus jannaschii EC#: 3.2.2 IUBMB 4.2.99.18 IUBMB
Gene Name(s): ogg MJ0724
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.251
  • R-Value Work: 0.202
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 89.44 α = 90.00
b = 37.84 β = 116.08
c = 75.01 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-12-09
  • Released Date: 2009-05-19
  • Deposition author(s): Faucher, F., Doublie, S.

Revision History

  • 2012-03-21
    Type: Citation | Details: Citation update
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4