3FH6

Crystal structure of the resting state maltose transporter from E. coli


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 4.50 Å
  • R-Value Free: 0.363 
  • R-Value Work: 0.340 

wwPDB Validation   3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

Alternating access in maltose transporter mediated by rigid-body rotations.

Khare, D.Oldham, M.L.Orelle, C.Davidson, A.L.Chen, J.

(2009) Mol Cell 33: 528-536

  • DOI: https://doi.org/10.1016/j.molcel.2009.01.035
  • Primary Citation of Related Structures:  
    3FH6

  • PubMed Abstract: 

    ATP-binding cassette transporters couple ATP hydrolysis to substrate translocation through an alternating access mechanism, but the nature of the conformational changes in a transport cycle remains elusive. Previously we reported the structure of the maltose transporter MalFGK(2) in an outward-facing conformation in which the transmembrane (TM) helices outline a substrate-binding pocket open toward the periplasmic surface and ATP is poised for hydrolysis along the closed nucleotide-binding dimer interface. Here we report the structure of the nucleotide-free maltose transporter in which the substrate binding pocket is only accessible from the cytoplasm and the nucleotide-binding interface is open. Comparison of the same transporter crystallized in two different conformations reveals that alternating access involves rigid-body rotations of the TM subdomains that are coupled to the closure and opening of the nucleotide-binding domain interface. The comparison also reveals that point mutations enabling binding protein-independent transport line dynamic interfaces in the TM region.


  • Organizational Affiliation

    Department of Biological Sciences, Purdue University, West Lafayette, IN 47907, USA.


Macromolecules
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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Maltose transport system permease protein malFA [auth F],
E [auth H]
480Escherichia coli K-12Mutation(s): 0 
Gene Names: b4033JW3993malF
Membrane Entity: Yes 
UniProt
Find proteins for P02916 (Escherichia coli (strain K12))
Explore P02916 
Go to UniProtKB:  P02916
Entity Groups  
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UniProt GroupP02916
Sequence Annotations
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  • Reference Sequence
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Maltose transport system permease protein malGB [auth G],
F [auth I]
296Escherichia coli K-12Mutation(s): 0 
Gene Names: b4032JW3992malG
Membrane Entity: Yes 
UniProt
Find proteins for P68183 (Escherichia coli (strain K12))
Explore P68183 
Go to UniProtKB:  P68183
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UniProt GroupP68183
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  • Reference Sequence
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
Maltose/maltodextrin import ATP-binding protein malKC [auth A],
D [auth B],
G [auth C],
H [auth D]
381Escherichia coli K-12Mutation(s): 0 
Gene Names: b4035JW3995malK
EC: 3.6.3.19
Membrane Entity: Yes 
UniProt
Find proteins for P68187 (Escherichia coli (strain K12))
Explore P68187 
Go to UniProtKB:  P68187
Entity Groups  
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UniProt GroupP68187
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 4.50 Å
  • R-Value Free: 0.363 
  • R-Value Work: 0.340 
  • Space Group: I 2 2 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 171.097α = 90
b = 209.48β = 90
c = 438.741γ = 90
Software Package:
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
SHARPphasing
DMphasing
CNSrefinement
PDB_EXTRACTdata extraction
MAR345data collection
HKL-2000data reduction

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2009-03-03
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Source and taxonomy, Version format compliance
  • Version 1.2: 2017-11-01
    Changes: Refinement description
  • Version 1.3: 2023-09-06
    Changes: Data collection, Database references, Refinement description