Crystal structure of thymidine kinase from Herpes simplex virus type 1 in complex with N-methyl-DHBT DOI:10.2210/pdb3f0t/pdb

3F0T   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (S)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Transferase Structure Weight: 72850.05 Molecule: Thymidine kinase Polymer: 1 Type: protein Length: 332 Chains: A, B EC#: 2.7.1.21    Fragment: Residues 45-376 Organism Herpes simplex virus (type 1 / strain 17) Gene Names TK UL23 UniProtKB:   Protein Feature View | Search PDB | P03176         Source Hide Polymer: 1 Scientific Name: Herpes simplex virus (type 1 / strain 17)   Taxonomy   Common Name: Virus Expression System: Escherichia coli       Related PDB Entries Hide Identifier Details 1E2H  Thymidine kinase from herpes simplex virus type 1 in the apo form  1E2P  Thymidine kinase from herpes simplex virus type 1 complexed with DHBT      Ligand Chemical Component Hide Identifier Formula Name Interactions NCV Search  Download  C10 H16 N2 O4 N-Methyl-6-(1,3-dihydroxy-isobutyl)thymine   Ligand Explorer SO4 Search  Download  O4 S SULFATE ION   Ligand Explorer     External Domain Annotations Hide CATH Classification v3.4.0: 2 Domains - data from CATH   Pfam Classification: 1 Domain - data from Pfam   GO Terms: 8 Terms - data from GO      Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 generated by PISA (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Pernot, L.,  Perozzo, R.,  Martic, M.,  Ametamey, S.,  Scapozza, L. Deposition:   2008-10-26 Release:   2009-11-03 Last Modified (REVDAT):   2011-08-03     Revision History    Hide Mouse over text for details 2011-08-03 Citation 2011-07-13 Version format compliance     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   2.00 R-Value: 0.211 (obs.) R-Free: 0.228 Space Group: C 2 2 21 Unit Cell:   Length [Å] Angles [°] a = 113.00 α = 90.00  b = 117.36 β = 90.00  c = 107.76 γ = 90.00