3EXY

Crystal structure of the 2[4Fe-4S] ferredoxin V13G variant from allochromatium vinosum

Structural Biology Knowledgebase: 3EXY SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.48 Å
  • R-Value Free: 0.218
  • R-Value Work: 0.162

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3EXY

Classification: ELECTRON TRANSPORT

Total Structure Weight: 9725.22

Macromolecule Entities
Molecule Chains Length Organism Details
Ferredoxin A 82 Allochromatium vinosum Mutation: V13G
Gene Name(s): fdx Alvin_2884

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SF4
Query on SF4

A IRON/SULFUR CLUSTER
Fe4 S4
LJBDFODJNLIPKO-VKOJMFJBAC
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.48 Å
  • R-Value Free: 0.218
  • R-Value Work: 0.162
  • Space Group: P 31 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 51.42 α = 90.00
b = 51.42 β = 90.00
c = 76.43 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-10-17
  • Released Date: 2009-05-05
  • Deposition author(s): Giastas, P., Saridakis, E., Mavridis, I.M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4