3EQ6

Crystal structure of human acyl-CoA synthetase medium-chain family member 2A (L64P mutation) in a ternary complex with products


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.236
  • R-Value Work: 0.187

Literature

Macromolecules
Sequence Display for 3EQ6

Classification: LIGASE

Total Structure Weight: 129038.81

Macromolecule Entities
Molecule Chains Length Organism Details
Acyl-coenzyme A synthetase ACSM2A A, B 570 Homo sapiens EC#: 6.2.1.2 IUBMB
Fragment: UNP residues 32-577
Mutation: L64P
Gene Name(s): ACSM2A Gene View ACSM2 MACS2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
BCO
Query on BCO

A, B Butyryl Coenzyme A
5,,5S (Synonym)
C25 H42 N7 O17 P3 S
CRFNGMNYKDXRTN-CITAKDKDSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
AMP
Query on AMP

A, B ADENOSINE MONOPHOSPHATE
C10 H14 N5 O7 P
UDMBCSSLTHHNCD-KQYNXXCUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.236
  • R-Value Work: 0.187
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 57.03 α = 90.00
b = 98.04 β = 94.12
c = 116.66 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-09-30
  • Released Date: 2008-10-28
  • Deposition author(s): Pilka, E.S., Kochan, G., Yue, W.W., Bhatia, C., Von delft, F., Arrowsmith, C.H., Edwards, A.M., Weigelt, J., Bountra, C., Oppermann, U., Structural Genomics Consortium (SGC)

Revision History

  • Version 1_0: 2008-10-28

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Advisory, Version format compliance

  • Version 1_2: 2015-02-11

    Type: Non-polymer description

  • Version 1_3: 2016-02-03

    Type: Non-polymer description