3EDI

Crystal structure of tolloid-like protease 1 (TLL-1) protease domain


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.4 Å
  • R-Value Free: 0.182
  • R-Value Work: 0.154

Literature

Macromolecules
Sequence Display for 3EDI

Classification: HYDROLASE

Total Structure Weight: 23547.26

Macromolecule Entities
Molecule Chains Length Organism Details
Tolloid-like protein 1 A 201 Homo sapiens EC#: 3.4.24 IUBMB
Fragment: protease domain
Gene Name(s): TLL1 Gene View TLL
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 4 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
DMS
Query on DMS

A DIMETHYL SULFOXIDE
C2 H6 O S
IAZDPXIOMUYVGZ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ACE
Query on ACE

A ACETYL GROUP
C2 H4 O
IKHGUXGNUITLKF-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.4 Å
  • R-Value Free: 0.182
  • R-Value Work: 0.154
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 41.28 α = 90.00
b = 58.92 β = 104.62
c = 47.44 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-09-03
  • Released Date: 2008-09-16
  • Deposition author(s): Mac Sweeney, A.

Revision History

  • Version 1_0: 2008-09-16

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance