RCSB Protein Data Bank - RCSB PDB - 3DTU Structure Summary

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Catalytic core subunits (I and II) of cytochrome c oxidase from Rhodobacter sphaeroides complexed with deoxycholic acid

DOI:10.2210/pdb3dtu/pdb

3DTU

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Primary Citation

Related Citations in PDB Entry (REMARK 1) Hide

Molecular Description

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Classification:	Oxidoreductase
Structure Weight:	198954.91

Molecule:

Cytochrome c oxidase subunit 1

Polymer:

Type:

protein

Length:

566

Chains:

A, C

EC#:

Organism

Rhodobacter sphaeroides

Gene Name

ctaD

UniProtKB:

| | P33517

Molecule:

Cytochrome c oxidase subunit 2

Polymer:

Type:

protein

Length:

262

Chains:

B, D

EC#:

Fragment:

UNP residues 26-281

Organism

Rhodobacter sphaeroides

Gene Names

ctaC coxII ctaB

UniProtKB:

| | Q03736

Source

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Polymer: 1

Scientific Name:

Rhodobacter sphaeroides

Taxonomy

Common Name:

Rhodopseudomonas sphaeroides

Expression System:

Rhodobacter sphaeroides

Polymer: 2

Scientific Name:

Rhodobacter sphaeroides

Taxonomy

Common Name:

Rhodopseudomonas sphaeroides

Expression System:

Rhodobacter sphaeroides

Related PDB Entries

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Identifier	Details
2GSM	Catalytic core subunits (I and II) of cytochrome c oxidase from Rodobacter sphaeroides without deoxycholic acid

Ligand Chemical Component

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Identifier	Formula	Name	Interactions
CA Search Download	Ca	CALCIUM ION		Ligand Explorer
CD Search Download	Cd	CADMIUM ION		Ligand Explorer
CU Search Download	Cu	COPPER (II) ION		Ligand Explorer
DMU Search Download	C₂₂ H₄₂ O₁₁	DECYL-BETA-D-MALTOPYRANOSIDE		Ligand Explorer
DXC Search Download	C₂₄ H₄₀ O₄	(3ALPHA,5BETA,12ALPHA)-3,12-DIHYDROXYCHOLAN- 24-OIC ACID		Ligand Explorer
HEA Search Download	C₄₉ H₅₆ Fe N₄ O₆	HEME-A		Ligand Explorer
HTO Search Download	C₇ H₁₆ O₃	HEPTANE-1,2,3-TRIOL		Ligand Explorer
MG Search Download	Mg	MAGNESIUM ION		Ligand Explorer
OH Search Download	H O	HYDROXIDE ION		Ligand Explorer
PO4 Search Download	O₄ P	PHOSPHATE ION		Ligand Explorer
TRD Search Download	C₁₃ H₂₈	TRIDECANE		Ligand Explorer

External Domain Annotations Hide
SCOP Classification v1.75: 6 Domains - data from SCOP

CATH Classification v3.4.0: 6 Domains - data from CATH

Pfam Classification: 3 Domains - data from Pfam

GO Terms: 27 Terms - data from GO
Structural Biology Knowledgebase Data Hide