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Opposite GATA DNA binding
DOI:10.2210/pdb3dfx/pdb   NDB ID: PD1148
3DFX
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transcription/dna
    Structure Weight: 26483.07
    Molecule: DNA (5'-D(*DTP*DTP*DGP*DAP*DTP*DAP*DAP*DAP*DTP*DCP*DAP*DGP*DAP*DGP*DAP*DTP*DAP*DAP*DCP*DC)-3')
    Polymer: 1 Type: dna Length: 20
    Chains: X
    Molecule: DNA (5'-D(*DAP*DAP*DGP*DGP*DTP*DTP*DAP*DTP*DCP*DTP*DCP*DTP*DGP*DAP*DTP*DTP*DTP*DAP*DTP*DC)-3')
    Polymer: 2 Type: dna Length: 20
    Chains: Y
    Molecule: Trans-acting T-cell-specific transcription factor GATA-3
    Polymer: 3 Type: protein Length: 63
    Chains: A, B
    Fragment: UNP residues 308-370
    Organism Mus musculus
    Gene Names Gata3 Gata-3
    UniProtKB:   Protein Feature View | Search PDB | P23772  
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 3
    Scientific Name: Mus musculus   Taxonomy   Common Name: Mouse Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    3DFV  Adjacent GATA DNA binding 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    ZN
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    ZN Zn
    ZINC ION
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: PD1148
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Bates, D.L.,  Kim, G.K.,  Guo, L.,  Chen, L.

    Deposition:   2008-06-12
    Release:   2008-07-29
    Last Modified (REVDAT):   2009-02-24
     
  •   Revision History    Hide
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.70
    R-Value: 0.276 (work)
    R-Free: 0.298
    Space Group: C 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 128.88 α = 90.00 
    b = 30.37 β = 93.82 
    c = 75.65 γ = 90.00