Complex of elongating Escherichia coli 70S ribosome and EF4(LepA)-GMPPNP
3DEG
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Ribosome
    Structure Weight: 190060.31
    Molecule: A/L-tRNA
    Polymer: 1 Type: rna Length: 76
    Chains: A
    Organism: Escherichia coli
    Molecule: P-tRNA
    Polymer: 2 Type: rna Length: 77
    Chains: B
    Organism: Escherichia coli
    Molecule: 30S RNA helix 8
    Polymer: 3 Type: rna Length: 16
    Chains: E
    Organism: Escherichia coli
    Molecule: 30S RNA helix 14
    Polymer: 4 Type: rna Length: 12
    Chains: F
    Organism: Escherichia coli
    Molecule: 50S RNA helix 42-44
    Polymer: 5 Type: rna Length: 70
    Chains: G
    Organism: Escherichia coli
    Molecule: 50S RNA helix 95
    Polymer: 6 Type: rna Length: 29
    Chains: I
    Organism: Escherichia coli
    Molecule: 50S RNA helix 71
    Polymer: 7 Type: rna Length: 18
    Chains: J
    Organism: Escherichia coli
    Molecule: 50S RNA helix 92
    Polymer: 8 Type: rna Length: 15
    Chains: K
    Organism: Escherichia coli
    Molecule: GTP-binding protein lepA
    Polymer: 9 Type: protein Length: 545
    Chains: C
    EC#: 3.6.5.n1   
    Fragment: EF4
    Organism: Escherichia coli K-12
    Gene Names: lepA b2569 JW2553
    UniProtKB: Search PDB | P60785   Protein Feature View
    Molecule: 30S ribosomal protein S12
    Polymer: 10 Type: protein Length: 123
    Chains: D
    Organism: Escherichia coli K-12
    Gene Names: rpsL strA b3342 JW3304
    UniProtKB: Search PDB | P0A7S3   Protein Feature View
    Molecule: 50S ribosomal protein L11
    Polymer: 11 Type: protein Length: 141
    Chains: H
    Organism: Escherichia coli K-12
    Gene Names: rplK relC b3983 JW3946
    UniProtKB: Search PDB | P0A7J7   Protein Feature View
     

  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 2
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 3
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 4
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 5
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 6
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 7
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 8
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 9
    Scientific Name: Escherichia coli   Taxonomy   Expression System: Escherichia coli  
    Polymer: 10
    Scientific Name: Escherichia coli   Taxonomy    
    Polymer: 11
    Scientific Name: Escherichia coli   Taxonomy    
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    2MG
    Search 
    2MG C11 H16 N5 O8 P G rnaLinking
    H2U
    Search 
    H2U C9 H15 N2 O9 P U rnaLinking
    M2G
    Search 
    M2G C12 H18 N5 O8 P G rnaLinking
    OMC
    Search 
    OMC C10 H16 N3 O8 P C rnaLinking
    OMG
    Search 
    OMG C11 H16 N5 O8 P G rnaLinking
    YG
    Search 
    YG C21 H29 N6 O12 P G rnaLinking
    PSU
    Search 
    PSU C9 H13 N2 O9 P U rnaLinking
    5MC
    Search 
    5MC C10 H16 N3 O8 P C rnaLinking
    7MG
    Search 
    7MG C11 H18 N5 O8 P G rnaLinking
    5MU
    Search 
    5MU C10 H15 N2 O9 P U rnaLinking
    1MA
    Search 
    1MA C11 H16 N5 O7 P A rnaLinking
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors
Downloadable viewers: