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Crystal structure of an activated (Thr->Asp) Polo-like kinase 1 (Plk1) catalytic domain in complex with Compound 257
3DBC
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transferase
    Structure Weight: 36392.79
    Molecule: Polo-like kinase 1
    Polymer: 1 Type: protein Length: 317
    Chains: A
    EC#: 2.7.11.21   
    Fragment: Plk1 kinase domain
    Mutation: T196D
    Organism Danio rerio
    Gene Name plk1
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  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Danio rerio   Taxonomy   Common Name: Zebrafish Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    3d5w   
    3db6   
    3db8   
    3dbd   
    3dbe   
    3dbf   
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    2FR
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    2FR C24 H25 N5 O
    3-[3-(3-methyl-6-{[(1S)-1-phenylethyl]amino}- 1H-pyrazolo[4,3-c]pyridin-1-yl)phenyl]propanamide
    2FR:3DBC
     
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  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Elling, R.A.,  Zhu, J.,  Barr, K.J.,  Romanowski, M.J.

    Deposition:   2008-05-31
    Release:   2008-10-07
    Last Modified (REVDAT):   2009-02-24
     
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   3.35
    R-Value: 0.245 (obs.)
    R-Free: 0.288
    Space Group: I 2 3
    Unit Cell:
      Length [Å] Angles [°]
    a = 135.07 α = 90.00 
    b = 135.07 β = 90.00 
    c = 135.07 γ = 90.00