3CU8

Impaired binding of 14-3-3 to Raf1 is linked to Noonan and LEOPARD syndrome

Structural Biology Knowledgebase: 3CU8 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.259
  • R-Value Work: 0.188

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3CU8

Classification: PROTEIN BINDING SIGNALING PROTEIN

Total Structure Weight: 57837.36

Macromolecule Entities
Molecule Chains Length Organism Details
14-3-3 protein zeta/delta A, B 245 Homo sapiens Gene Name(s): YWHAZ Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
RAF proto-oncogene serine/threonine-protein kinase P, Q 9 Homo sapiens EC#: 2.7.11.1 IUBMB
Fragment: Phosphorylated cRaf1 peptide
Gene Name(s): RAF1 Gene View RAF
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PPI
Query on PPI

A PROPANOIC ACID
C3 H6 O2
XBDQKXXYIPTUBI-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, Q MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
SEP
Query on SEP
P, Q L-PEPTIDE LINKING C3 H8 N O6 P SER

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.259
  • R-Value Work: 0.188
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 72.40 α = 90.00
b = 83.84 β = 90.00
c = 111.65 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-04-16
  • Released Date: 2009-05-05
  • Deposition author(s): Schumacher, B., Weyand, M., Kuhlmann, J., Ottmann, C.

Revision History

  • 2011-07-13
    Type: Flag residual B-value | Details: Tagged residual B temperature factor
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4