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Structure of Rattus norvegicus NTPDase2 in complex with calcium and AMPPNP
3CJA
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase
    Structure Weight: 51158.78
    Molecule: Ectonucleoside triphosphate diphosphohydrolase 2
    Polymer: 1 Type: protein Length: 456
    Chains: A
    Fragment: Ectodomain, Extracellular domain, UNP residues 29-461
    Organism Rattus norvegicus
    Gene Names Entpd2 Cd39l1
    UniProtKB:   Protein Feature View | Search PDB | O35795  
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Rattus norvegicus   Taxonomy   Common Name: Norway rat Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    3CJ1  apo form 
    3CJ7  AMP complex 
    3CJ9  Ca2+xAMPxPi complex 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    ANP
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    ANP C10 H17 N6 O12 P3
    PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
    ANP:3CJA
    CA
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    CA Ca
    CALCIUM ION
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Zebisch, M.,  Strater, N.

    Deposition:   2008-03-12
    Release:   2008-04-29
    Last Modified (REVDAT):   2009-02-24
     
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.10
    R-Value: 0.167 (obs.)
    R-Free: 0.210
    Space Group: P 21 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 40.90 α = 90.00 
    b = 68.87 β = 90.00 
    c = 163.72 γ = 90.00