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Crystal structure of human transthyretin in complex with 1-amino-5-naphthalene sulfonate
3CFT
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transport Protein
    Structure Weight: 26592.94
    Molecule: Transthyretin
    Polymer: 1 Type: protein Length: 118
    Chains: A, B
    Fragment: UNP residues 30-147
    Organism Homo sapiens
    Gene Names TTR PALB
    UniProtKB:   Protein Feature View | Search PDB | P02766  
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    3CFM  Crystal structure of the apo form of human wild-type transthyretin 
    3CFN  Same protein in complex with 1-anilino-8-naphthalene sulfonate 
    3CFQ  Same protein in complex with diclofenac 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    5NS
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    5NS C10 H9 N O3 S
    5-aminonaphthalene-1-sulfonic acid
    5NS:3CFT
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    5NS
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    5NS
    Kd: 64000 nM (100) - data from BindingDB  
    Kd: 64000 nM - data from BindingMOAD  
    Kd: 64000 nM - data from PDBbind  
     
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  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly 1       
Biological assembly 1 generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Lima,  L.-M.T.R., Foguel,  D.,  Polikarpov, I.

    Deposition:   2008-03-04
    Release:   2009-03-03
    Last Modified (REVDAT):   2010-02-16
     
  •   Revision History    Hide
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   1.87
    R-Value: 0.194 (obs.)
    R-Free: 0.239
    Space Group: P 21 21 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 42.96 α = 90.00 
    b = 85.61 β = 90.00 
    c = 63.80 γ = 90.00