POP-OUT | CLOSE
 
Structural adaptation and conservation in quadruplex-drug recognition
DOI:10.2210/pdb3cdm/pdb   NDB ID: DD0092
3CDM
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: DNA
    Structure Weight: 18228.08
    Molecule: DNA (5'-D(*DT*DAP*DGP*DGP*DGP*DTP*DTP*DAP*DGP*DGP*DGP*DTP*DTP*DAP*DGP*DGP*DGP*DTP*DTP*DAP*DGP*DGP*DG)-3')
    Polymer: 1 Type: dna Length: 23
    Chains: A, B
     
  •   Structure Validation Hide

    Download full validation report    

     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    3CCO  Human Telomeric Sequence bound to same ligand 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    K
    Search 
    Download 
    K K
    POTASSIUM ION
    NII
    Search 
    Download 
    NII C30 H42 N6 O6
    2,7-bis[3-(dimethylamino)propyl]-4,9-bis[(3- hydroxypropyl)amino]benzo[lmn][3,8]phenanthroline- 1,3,6,8(2H,7H)-tetrone
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: DD0092
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PISA (software)
Downloadable viewers:
 
 
 
  •   MyPDB Personal Annotations Hide
     
  •   Deposition Summary Hide
    Authors:   Parkinson, G.N.,  Neidle, S.

    Deposition:   2008-02-27
    Release:   2008-09-23
    Last Modified (REVDAT):   2009-02-24
     
  •   Revision History    Hide
    Mouse over text for details
    2011-07-13
    Version format compliance
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.10
    R-Value: 0.234 (obs.)
    R-Free: 0.295
    Space Group: P 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 39.58 α = 90.00 
    b = 43.08 β = 103.58 
    c = 56.94 γ = 90.00