CSL (Lag-1) bound to DNA with Lin-12 RAM peptide, C2221
DOI:10.2210/pdb3brf/pdb   NDB ID: PD1068
3BRF
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: DNA Binding Protein/dna
    Structure Weight: 65040.71
    Molecule: DNA (5'-D(*DTP*DTP*DAP*DCP*DTP*DGP*DTP*DGP*DGP*DGP*DAP*DAP*DAP*DGP*DA)-3')
    Polymer: 1 Type: dna Length: 15
    Chains: B
    Molecule: DNA (5'-D(*DAP*DAP*DTP*DCP*DTP*DTP*DTP*DCP*DCP*DCP*DAP*DCP*DAP*DGP*DT)-3')
    Polymer: 2 Type: dna Length: 15
    Chains: C
    Molecule: Lin-12 and glp-1 phenotype protein 1, isoform a
    Polymer: 3 Type: protein Length: 478
    Chains: A
    Fragment: core domain
    Organism: Caenorhabditis elegans
    UniProtKB: Protein Feature View | Search PDB | Q9TYY1  
    Molecule: Protein lin-12
    Polymer: 4 Type: protein Length: 14
    Chains: D
    Fragment: RAM peptide
    Organism: Caenorhabditis elegans
    Gene Names: lin-12 R107.8
    UniProtKB: Protein Feature View | Search PDB | P14585  
     
  •   Structure Validation Hide

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  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 3
    Scientific Name: Caenorhabditis elegans   Taxonomy   Expression System: Escherichia coli  
    Polymer: 4
    Scientific Name: Caenorhabditis elegans   Taxonomy   Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    3BRD    
    3BRG    
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    SOR
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    SOR C6 H14 O6
    D-SORBITOL
    SOR:3BRF
     
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  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure:PD1068
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Wilson, J.J.,  Kovall, R.A.

    Deposition:   2007-12-21
    Release:   2008-04-01
    Last Modified (REVDAT):   2009-02-24
     
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    Resolution[Å]:   2.47
    R-Value: 0.232 (obs.)
    R-Free: 0.277
    Space Group: C 2 2 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 62.94 α = 90.00 
    b = 95.97 β = 90.00 
    c = 223.63 γ = 90.00