3BH6

Crystal structure of the RP2-Arl3 complex bound to GppNHp


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.271
  • R-Value Work: 0.215

Literature

Macromolecules
Sequence Display for 3BH6

Classification: SIGNALING PROTEIN

Total Structure Weight: 58743.43

Macromolecule Entities
Molecule Chains Length Organism Details
ADP-ribosylation factor-like protein 3 A 164 Mus musculus Fragment: residues 14-177
Mutation: Q71L
Gene Name(s): Arl3
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Protein XRP2 B 352 Homo sapiens Gene Name(s): RP2 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GNP
Query on GNP

A PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
C10 H17 N6 O13 P3
UQABYHGXWYXDTK-UUOKFMHZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.271
  • R-Value Work: 0.215
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 73.86 α = 90.00
b = 78.49 β = 90.00
c = 98.38 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-11-28
  • Released Date: 2008-03-25
  • Deposition author(s): Veltel, S., Gasper, R., Wittinghofer, A.

Revision History

  • Version 1_0: 2008-03-25

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance

  • Version 1_2: 2014-03-05

    Type: Database references