Crystal structures of novel allosteric peptide inhibitors of HIV integrase in the LEDGF binding site DOI:10.2210/pdb3avc/pdb

3AVC   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A+S)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Recombination/inhibitor Structure Weight: 42889.00 Molecule: Integrase Polymer: 1 Type: protein Length: 183 Chains: A, B Fragment: CCD domain (UNP RESIDUES 1197-1359) Mutation: C56S, F139D, F185H Organism Human immunodeficiency virus type 1 (NEW YORK-5 ISOLATE) Gene Name gag-pol UniProtKB:   Protein Feature View | Search PDB | P12497     Molecule: LEDGF peptide Polymer: 2 Type: protein Length: 8 Chains: D, F Organism Homo sapiens     Source Hide Polymer: 1 Scientific Name: Human immunodeficiency virus type 1   Taxonomy   Common Name: Hiv-1 Expression System: Escherichia coli   Polymer: 2 Scientific Name: Synthetic construct (Homo sapiens)   Taxonomy         Related PDB Entries Hide Identifier Details 3AV9    3AVA    3AVB    3AVF    3AVG    3AVH    3AVI    3AVJ    3AVK    3AVL    3AVM    3AVN        Ligand Chemical Component Hide Identifier Formula Name Interactions ACY Search  Download  C2 H4 O2 ACETIC ACID   Ligand Explorer CL Search  Download  Cl CHLORIDE ION   Ligand Explorer SO4 Search  Download  O4 S SULFATE ION   Ligand Explorer     External Domain Annotations Hide Pfam Classification: 1 Domain - data from Pfam       Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PISA (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Peat, T.S.,  Deadman, J.J.,  Newman, J.,  Rhodes, D.I. Deposition:   2011-03-02 Release:   2012-01-18     Revision History    Hide Mouse over text for details 2013-03-13 Other 2012-12-12 Other     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   1.77 R-Value: 0.160 (obs.) R-Free: 0.196 Space Group: P 31 Unit Cell:   Length [Å] Angles [°] a = 70.94 α = 90.00  b = 70.94 β = 90.00  c = 67.00 γ = 120.00