2WD2

A CHIMERIC MICROTUBULE DISRUPTOR WITH EFFICACY ON A TAXANE RESISTANT CELL LINE

Structural Biology Knowledgebase: 2WD2 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.49 Å
  • R-Value Free: 0.227
  • R-Value Work: 0.205

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2WD2

Classification: LYASE

Total Structure Weight: 29805.38

Macromolecule Entities
Molecule Chains Length Organism Details
CARBONIC ANHYDRASE 2 A 259 Homo sapiens EC#: 4.2.1.1 IUBMB
Fragment: RESIDUES 2-260
Gene Name(s): CA2 Gene View

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MS5
Query on MS5

A 7-methoxy-2-(3-methoxybenzyl)-1,2,3,4-tetrahydroisoquinolin- 6-yl sulfamate
2, (Synonym)
C18 H22 N2 O5 S
BNHMNJHBVHWFAX-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
FMT
Query on FMT

A FORMIC ACID
C H2 O2
BDAGIHXWWSANSR-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.49 Å
  • R-Value Free: 0.227
  • R-Value Work: 0.205
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 42.07 α = 90.00
b = 71.71 β = 90.00
c = 74.14 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-03-19
  • Released Date: 2010-03-31
  • Deposition author(s): Leese, M.P., Jourdan, F.L., Kimberley, M.R., Cozier, G.E., Regis-Lydi, S., Foster, P.A., Newman, S.P., Thiyagarajan, N., Acharya, K.R., Ferrandis, E., Purohit, A., Reed, M.J., Potter, B.V.L.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4