2V6V

The structure of the Bem1p PX domain


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.256
  • R-Value Work: 0.222

Literature

Macromolecules
Sequence Display for 2V6V

Classification: REGULATOR

Total Structure Weight: 36480.63

Macromolecule Entities
Molecule Chains Length Organism Details
BUD EMERGENCE PROTEIN 1 A, B 156 Saccharomyces cerevisiae Fragment: PX DOMAIN, RESIDUES 266-413
Gene Name(s): BEM1 SRO1 YBR200W YBR1412
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
DTT
Query on DTT

A 2,3-DIHYDROXY-1,4-DITHIOBUTANE
1,4-DITHIOTHREITOL (Synonym)
C4 H10 O2 S2
VHJLVAABSRFDPM-IMJSIDKUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.256
  • R-Value Work: 0.222
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 61.01 α = 90.00
b = 71.62 β = 90.00
c = 75.32 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-07-21
  • Released Date: 2007-07-31
  • Deposition author(s): Stahelin, R.V., Karathanassis, D., Murray, D., Williams, R.L., Cho, W.

Revision History

  • Version 1_0: 2007-07-31

    Type: Initial release

  • Version 1_1: 2011-05-08

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance