2OI6
E. coli GlmU- Complex with UDP-GlcNAc, CoA and GlcN-1-PO4
- PDB DOI: https://doi.org/10.2210/pdb2OI6/pdb
- Classification: TRANSFERASE
- Organism(s): Escherichia coli
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No 
- Deposited: 2007-01-10 Released: 2007-06-19 
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.20 Å
- R-Value Free: 0.208 
- R-Value Work: 0.178 
- R-Value Observed: 0.178 
This is version 2.1 of the entry. See complete history. 
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Bifunctional protein glmU | 456 | Escherichia coli | Mutation(s): 0  Gene Names: glmU EC: 2.7.7.23 (PDB Primary Data), 2.3.1.157 (PDB Primary Data) | ||
UniProt | |||||
Find proteins for P0ACC7 (Escherichia coli (strain K12)) Explore P0ACC7  Go to UniProtKB:  P0ACC7 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0ACC7 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
Ligands 6 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
COA Query on COA | F [auth A], M [auth B] | COENZYME A C21 H36 N7 O16 P3 S RGJOEKWQDUBAIZ-IBOSZNHHSA-N | |||
UD1 Query on UD1 | G [auth A], N [auth B] | URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE C17 H27 N3 O17 P2 LFTYTUAZOPRMMI-CFRASDGPSA-N | |||
GP1 Query on GP1 | C [auth A], H [auth B] | 2-amino-2-deoxy-1-O-phosphono-alpha-D-glucopyranose C6 H14 N O8 P YMJBYRVFGYXULK-QZABAPFNSA-N | |||
SO4 Query on SO4 | L [auth B] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
CO Query on CO | D [auth A], K [auth B] | COBALT (II) ION Co XLJKHNWPARRRJB-UHFFFAOYSA-N | |||
MG Query on MG | E [auth A], I [auth B], J [auth B] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.20 Å
- R-Value Free: 0.208 
- R-Value Work: 0.178 
- R-Value Observed: 0.178 
- Space Group: H 3 2
Unit Cell:
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 102.76 | α = 90 |
b = 102.76 | β = 90 |
c = 644.828 | γ = 120 |
Software Name | Purpose |
---|---|
CNS | refinement |
MAR345dtb | data collection |
DENZO | data reduction |
SCALEPACK | data scaling |
CNS | phasing |
Entry History 
Deposition Data
- Released Date: 2007-06-19  Deposition Author(s): Olsen, L.R., Vetting, M.W., Roderick, S.L.
Revision History (Full details and data files)
- Version 1.0: 2007-06-19
Type: Initial release - Version 1.1: 2008-05-01
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 2.0: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Atomic model, Data collection, Derived calculations, Structure summary - Version 2.1: 2023-08-30
Changes: Data collection, Database references, Refinement description, Structure summary