2NBH

Solution structure of the HYD1 hydrophobin from Schizophyllum commune


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 200 
  • Conformers Submitted: 20 
  • Selection Criteria: structures with the lowest energy 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Characterization of a Basidiomycota hydrophobin reveals the structural basis for a high-similarity Class I subdivision.

Gandier, J.A.Langelaan, D.N.Won, A.O'Donnell, K.Grondin, J.L.Spencer, H.L.Wong, P.Tillier, E.Yip, C.Smith, S.P.Master, E.R.

(2017) Sci Rep 7: 45863-45863

  • DOI: https://doi.org/10.1038/srep45863
  • Primary Citation of Related Structures:  
    2NBH

  • PubMed Abstract: 

    Class I hydrophobins are functional amyloids secreted by fungi. They self-assemble into organized films at interfaces producing structures that include cellular adhesion points and hydrophobic coatings. Here, we present the first structure and solution properties of a unique Class I protein sequence of Basidiomycota origin: the Schizophyllum commune hydrophobin SC16 (hyd1). While the core β-barrel structure and disulphide bridging characteristic of the hydrophobin family are conserved, its surface properties and secondary structure elements are reminiscent of both Class I and II hydrophobins. Sequence analyses of hydrophobins from 215 fungal species suggest this structure is largely applicable to a high-identity Basidiomycota Class I subdivision (IB). To validate this prediction, structural analysis of a comparatively distinct Class IB sequence from a different fungal order, namely the Phanerochaete carnosa PcaHyd1, indicates secondary structure properties similar to that of SC16. Together, these results form an experimental basis for a high-identity Class I subdivision and contribute to our understanding of functional amyloid formation.


  • Organizational Affiliation

    Department of Chemical Engineering and Applied Chemistry, University of Toronto, Toronto, Ontario, Canada.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Fungal hydrophobin107Schizophyllum commune H4-8Mutation(s): 0 
Gene Names: HYD1SCHCODRAFT_58269
UniProt
Find proteins for D8QCG9 (Schizophyllum commune (strain H4-8 / FGSC 9210))
Explore D8QCG9 
Go to UniProtKB:  D8QCG9
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupD8QCG9
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 200 
  • Conformers Submitted: 20 
  • Selection Criteria: structures with the lowest energy 

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2016-03-16
    Type: Initial release
  • Version 1.1: 2020-09-30
    Changes: Data collection, Database references
  • Version 1.2: 2023-06-14
    Changes: Database references, Other