2MUS

HADDOCK calculated model of LIN5001 bound to the HET-s amyloid


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 200
  • Conformers Submitted: 4
  • Selection Criteria: Target Function

Literature

Macromolecules
Sequence Display for 2MUS

Classification: PROTEIN FIBRIL

Total Structure Weight: 43955.31

Macromolecule Entities
Molecule Chains Length Organism Details
Heterokaryon incompatibility protein s A, B, C, D, E 79 Podospora anserina Fragment: C-terminal prion forming domain (UNP residues 218-289)
Mutation: E265K
Gene Name(s): het-s small s
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
3LS
Query on 3LS

B 3''',4'-bis(carboxymethyl)-2,2':5',2'':5'',2''':5''',2''''- quinquethiophene-5,5''''-dicarboxylic acid
C26 H16 O8 S5
SZFMXSCJFCPHEZ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 200
  • Conformers Submitted: 4
  • Selection Criteria: target function

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-09-16
  • Released Date: 2017-02-01
  • Deposition author(s): Hermann, U.S., Schuetz, A.K., Shirani, H., Saban, D., Nuvolone, M., Huang, D.H., Li, B., Ballmer, B., Aslund, A.K.O., Mason, J.J., Rushing, E., Budka, H., Hammarstrom, P., Bockmann, A., Caflisch, A., Meier, B.H., Nilsson, P.K.R., Hornemann, S., Aguzzi, A.

Revision History

  • 2017-02-22
    Type: Database references